BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005F05LP1|AL425403
(754 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1441 0.0
>3x_Contig1619
Length = 7770
Score = 1441 bits (720), Expect = 0.0
Identities = 741/754 (98%), Gaps = 1/754 (0%)
Strand = Plus / Plus
Query: 1 caaccctagggttgggtgatgtcgcgcaggattataatataaacaaaccccgcggctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1727 caaccctagggttgggtgatgtcgcgcaggattataatataaacaaaccccgcggctacc 1786
Query: 61 tccagtattgaaagtagccgcggggaatattattaatatataaattatctactagtgatt 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1787 tccagtattgaaagtagccgcggngaatattattaatatataaattatctactagtgatt 1846
Query: 121 ctacaatttctaaaaatattaaattagaattatgtaataaattaaatgaagaattaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1847 ctacaatttctaaaaatattaaattagaattatgtaataaattaaatgaagaattaaata 1906
Query: 181 ctaattcttcaaaccatactcccccccgcncggcatcgccctaccgtagg-tagggcgag 239
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 1907 ctaattcttcaaaccatactcccccccgcgcggcatcgccctaccgtagggtagggcgag 1966
Query: 240 ccgcgcggggaatatgatgatattatttctaaaattaatattgaatatattgtaggattt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1967 ccgcgcggggaatatgatgatattatttctaaaattaatattgaatatattgtaggattt 2026
Query: 300 atcgaagctgaaggtcatttagctatttctaaaaatataaacaataactataaaataagt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2027 atcgaagctgaaggtcatttagctatttctaaaaatataaacaataactataaaataagt 2086
Query: 360 ttagaagtatctcaacatataaattcacccgckgctcctcccttcggggggagaccgcgg 419
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2087 ttagaagtatctcaacatataaattcacccgcggctcctcccttcggggggagaccgcgg 2146
Query: 420 ggaagatttaatgaaggctattcaagatactattttwrattgaactcctgataatagttt 479
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 2147 ggaagatttaatgaaggctattcaagatactattttaaattgaactcctgataatagttt 2206
Query: 480 attatatgatttacctaaatctactaataaaatttataadcbccgcggctcctcccctgg 539
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 2207 attatatgatttacctaaatctactaataaaatttataaaccccgcggctcctcccctgg 2266
Query: 540 taatccctttaaaggggaggagtccgcggggaagatagtaataratatwgattttvvatt 599
||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||
Sbjct: 2267 taatccctttaaaggggaggagtccgcggggaagatagtaataaatatagattttaaatt 2326
Query: 600 tctagtactgatagattatattatcaagtatttccaactatgttaaatagtggattatat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2327 tctagtactgatagattatattatcaagtatttccaactatgttaaatagtggattatat 2386
Query: 660 actagaraatatattgattttgtaatgtgattttctagtattatcattataaaacatggt 719
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2387 actagaaaatatattgattttgtaatgtgattttctagtattatcattataaaacatggt 2446
Query: 720 ttacataaaacattagagggtcaattattattag 753
||||||||||||||||||||||||||||||||||
Sbjct: 2447 ttacataaaacattagagggtcaattattattag 2480
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6260
Number of Sequences: 1807
Number of extensions: 6260
Number of successful extensions: 204
Number of sequences better than 1.0e-20: 1
length of query: 754
length of database: 10,358,551
effective HSP length: 16
effective length of query: 738
effective length of database: 10,329,639
effective search space: 7623273582
effective search space used: 7623273582
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)